Latest Publications:

• The Evolution of Dependence and Cohesion in Incipient Endosymbioses by Gaurav S. Athreya, Peter Czuppon and Chaitanya S. Gokhale
• Cell-Cycle Dependence of Bursty Gene Expression: Insights from Fitting Mechanistic Models to Single-Cell RNA-Seq Data by Augustinas Sukys and Ramon Grima
• How Genotype-by-Environment Interactions Can Maintain Variation in Mutualisms by Christopher I. Carlson, Megan E. Frederickson and Matthew M. Osmond
• Effect of Assortative Mating and Sexual Selection on Polygenic Barriers to Gene Flow by Parvathy Surendranadh and Himani Sachdeva
• Growth Rate-Driven Modelling Suggests That Phenotypic Adaptation Drives Drug Resistance in BRAFV600E-Mutant Melanoma by Sara Hamis et al.
• Deleterious Mutations and Selection for Sex in Spatially Structured, Diploid Populations by Louise Fouqueau and Denis Roze
• Reinforced Molecular Dynamics: Physics-Infused Generative Machine Learning Model Explores CRBN Activation Process by István Kolossváry and Rory Coffey
• The NHSL1-A Complex Interacts with the Arp2/3 Complex and Controls Cell Migration Efficiency and Chemotaxis by Shamsinar Jalal et al.
• NHSL3 Interacts with Ena/VASP Proteins and the Scar/WAVE Complex and Promotes Cell Migration by Tommy Pallett et al.
• Sexual Antagonism, Mating Systems, and Recombination Suppression on Sex Chromosomes by Ewan Flintham and Charles Mullon
• When Blood Needs to Flow: The Role of the Complement System in Red Blood Cell Clearance during Immune Responses by Clemente F. Arias et al.
• Successful Strategies in the Voluntarily Repeated Prisoner's Dilemma by Luis R. Izquierdo, Segismundo S. Izquierdo and Robert Boyd
• Alternative Approaches to Single-Cell Trajectory Inference Using a Commute Time Matrix by Douglas W. Houston
• Local Adaptation of Life-History Traits in a Seasonal Environment by Rebekah Hall and Ailene MacPherson
• Nuclear Speckle Proteins Form Intrinsic and MALAT 1-Dependent Microphases by Min Kyung Shinn et al.
• Investigating the Role of Conformational Heterogeneity in FUS-RRM Fibrillation by Osama Aazmi et al.
• Finding Signatures of Low-Dimensional Geometric Landscapes in High-Dimensional Cell Fate Transitions by Maria Yampolskaya, Laertis Ikonomou and Pankaj Mehta
• The Evolution of Condition-Dependent Self-Fertilisation by Thomas Lesaffre, John R. Pannell and Charles Mullon
• Quantifying Interleaflet Coupling of Phase Behavior and Observing Anti-registered Phases in Asymmetric Lipid Bilayers by Kristen B. Kennison-Cook, Averi M. Cooper and Frederick A. Heberle
• Membrane Tubulation by Adhesion of Spherical Nanoparticles by Thomas R. Weikl
• Sub-second Extracellular Impedance Measurement of Epithelial Cell Monolayers Using Step Excitations and Time-Domain Analysis by Rongming Guo et al.
• A Mathematical Synthesis of Genetics, Development, and Evolution by and Mauricio González-Forero
• Time-Resolved Single-Molecule FRET Reveals Length-Dependent Nucleosome Decompaction by Poly(ADP-ribose) by Tianjin Yang et al.
• All-Optical Mapping of cAMP Transport Reveals Rules of Sub-cellular Localization by Katherine M. Xiang et al.
• Quantifying 3D Live-Cell Membrane Dynamics Using Dynamic Metal-Induced Energy Transfer Spectroscopy (dynaMIET) by José Ignacio Gallea et al.
• Topological Environment in Genetic and Metabolic Networks by Marco Polo Castillo-Villalba
• Metabolic Starvation-Induced Cell Swelling Drives Solid Stress in Tumors by Mohammad Dehghany et al.
• Quantifying Optical Sectioning in Reflection Microscopy with Patterned Illumination by Cathie Ventalon, Agathe Nidriche and Delphine Débarre
• Segmented Wavetrains and Sites of Reversal in the Mouse Seminiferous Tubules by Kei Sugihara et al.
• Enhancer-Mediated Metabolic Pre-patterning Defines Trabecular Cardiomyocyte Identity prior to Morphogenesis by Costantino Parisi et al.
• A Classification of Structured Coalescent Processes with Migration, Conditional on the Population Pedigree by Sabin Lessard, Terry Easlick and John Wakeley
• Source Codes and Data Files to Reproduce Figures of "Population Structure Amplifies Mutation Load" by Nikhil Sharma
• Quasi Epigenetic Equilibrium: The Implications of Plasticity and Variability on Evolution and Extinction by Puneeth Deraje and Matthew M. Osmond
• Application of Magnetoresistive Sensors to Zero- and Ultralow-Field Nuclear Magnetic Resonance by Román Picazo-Frutos et al.
• Population Structure Amplifies Mutation Load by Nikhil Sharma et al.
• A Pandemic-Scale Ancestral Recombination Graph for SARS-CoV-2 by Shing H. Zhan et al.
• High Levels of Mitotic Gene Conversion Are Needed to Effectively Purge Deleterious Mutations in Asexual Organisms by Dominik Kopčak and Matthew Hartfield
• Mean Fitness Is Maximized in Small Populations under Stabilizing Selection on Highly Polygenic Traits by Aaron P. Ragsdale
• How Economic Exchange Can Favour Human Genetic Diversity by Cedric Perret, Luís Santos-Pinto and Laurent Lehmann
• A Minimal Model for the Role of Rim4 in Regulating Meiotic Exit in Budding Yeast by V. Abigail Marquez Davila et al.
• Evaluating MINFLUX Experimental Performance in Silico by Zach Marin and Jonas Ries
• Simple Theoretical Models Predict Some—but Not All—Aspects of the Experimental Evolution of Antibiotic Resistance by Elin Lilja, Rosalind J. Allen and Bartlomiej Waclaw
• Metabolic Overflow Prevents Ecological Collapse in Microbial Populations by Clemente F. Arias et al.
• On the Conditions for Shifts in Metabolic Strategies by Maarten J. Droste, Robert Planqué and Frank J. Bruggeman
• Both Density- and Frequency-Dependent Effects Determine Plant Growth in a Dune Heath Ecosystem by Christian Damgaard et al.
• Electrical Oscillations in Microtubules by Md Mohsin et al.
• Hidden Interactions: Frequency-Dependence Emulates Selection-Driven Dynamics in Evolving Populations by Rowan J. Barker-Clarke et al.
• Extinction Vortices Are Driven More by a Shortage of Beneficial Mutations Than by Deleterious Mutation Accumulation by Walid Mawass et al.
• Growth Rate-Driven Modelling Suggests That Phenotypic Adaptation Drives Drug Resistance in BRAFV600E-Mutant Melanoma by Sara Hamis et al.
• A Continuous Landscape of Signaling Encodes a Corresponding Landscape of CAR T Cell Phenotype by Wansang Cho et al.
• Bridging Energy and Ribosomal Allocation Models to Predict the Cost of Traits in Different Environments by Mohammadjavad Meghrazi and Sarah P. Otto
• Enthalpy-Entropy Compensation by Philippe Dumas
• How Does Stochasticity in Learning Impact the Accumulation of Knowledge and the Evolution of Learning? by Ludovic Maisonneuve and Laurent Lehmann
• Response Metrics of T-Cell Activation Models by Xabier Rey Barreiro, Jose Faro and Alejandro F. Villaverde
• 3DTubularVoronoi: A Voronoi-Based Framework for Estimating Equilibrium Cellular Packing in 3D Tubular Epithelia by Léna Guitou et al.
• Supergene Control of Chiral Development in Mirror-Image Flowers by Haoran Xue et al.
• Elevated Mutation near Crossovers Inhibits the Evolution of Recombination by Bret A. Payseur and Sarah P. Otto
• Dilute Limit Coarsening with an Anisotropic Surface Tension by Arjun R. Anand, Melinda M. Andrews and Benjamin P. Vollmayr-Lee
• Extremal Couplings and Gluon Scattering in M-Theory by Shai M. Chester et al.
• Interface Correlators in Symmetric Product Orbifolds by Sebastian Harris, Volker Schomerus and Takashi Tsuda
• Counting AdS Vacua by Zihni Kaan Baykara, Alessandro Tomasiello and Cumrun Vafa
• When Sexual Selection Meets Genetic Drift: The Coevolution of Male Traits and Female Preferences in Finite Populations by Kuangyi Xu